Lei Fan
Lei Fan

Postdoctoral Fellow at CHeBA, UNSW

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About Me

I am currently a Postdoctoral Fellow at the Centre for Healthy Brain Ageing (CHeBA), UNSW. I received my PhD from UNSW Sydney in 2024, specializing in computer vision and machine learning.

My Research Interests.

  • MRI Data Analysis
  • Whole Slide Image Analysis
  • Visual Anomaly Detection
  • Grain Image Analysis

News

Kangaroo
[2025-03]
One paper (multimodel medical image segmentation) has been accepted for PR (IF: 7.5)!
Kangaroo
[2025-02]
Three papers (Image Anomaly Detection dataset, Interpretable Image Classification, and Weakly Image Segmentation) have been accepted for CVPR2025.
Kangaroo
[2024-12]
One paper (visual grain anomaly detection) has been accepted for IEEE TII (IF: 11.7).
Kangaroo
[2024-12]
One paper (human image generation) has been accepted for AAAI2025.
Kangaroo
[2024-11]
One paper (visual anomaly detection) has been accepted for IEEE TIM (IF: 5.6).
Kangaroo
[2024-10]
One paper (pathology images to transcriptomics) has been accepted for BIBM 2024.
Kangaroo
[2023-12]
One paper (visual anomaly detection) has been accepted for ICASSP 2024.
Kangaroo
[2023-11]
One paper (grain inspection) has been accepted for IEEE RA-L (IF: 5.2).
Kangaroo
[2023-10]
One paper (grain inspection) has been accepted for Scientific Data (IF: 9.8).
Kangaroo
[2023-07]
One paper (grain inspection) has been accepted for ECAI 2023.
Kangaroo
[2022-10]
One paper (cancer analysis with WSIs) has been accepted for IEEE TMI (IF: 10.6).
Kangaroo
[2022-05]
One paper (WSI style translation) has been accepted for MICCAI 2022.
Kangaroo
[2022-05]
One paper (grain inspection) has been accepted for CVPR 2022.
Kangaroo
[2021-05]
One paper (cancer analysis with WSIs) has been accepted for MICCAI 2021.

Publications

(* Corrsponding Author, + Equal Contributions)

2025

Multi-Modal Hypergraph Contrastive Learning for Medical Image Segmentation
Weipeng Jing, Junze Wang, Donglin Di, Dandan Li, Yang Song, Lei Fan*
Pattern Recognition (PR), 2025
中科院一区 (IF:7.5) CCF-B A* (Australian Core)
MANTA: A Large-Scale Multi-View and Visual-Text Anomaly Detection Dataset for Tiny Objects
Lei Fan*, Dongdong Fan, Zhiguang Hu, Yiwen Ding, Donglin Di, Kai Yi, Maurice Pagnucco, Yang Song
Conference on Computer Vision and Pattern Recognition (CVPR), 2025
[ArXiv] [Project]
CCF-A A* (Australian Core)
Prototype-Based Image Prompting for Weakly Supervised Histopathological Image Segmentation
Qingchen Tang+, Lei Fan+, Maurice Pagnucco, Yang Song
Conference on Computer Vision and Pattern Recognition (CVPR), 2025
CCF-A A* (Australian Core)
Interpretable Image Classification via Non-parametric Part Prototype Learning
Zhijie Zhu, Lei Fan+, Maurice Pagnucco, Yang Song
Conference on Computer Vision and Pattern Recognition (CVPR), 2025
CCF-A A* (Australian Core)
GrainBrain: Multi-View Identification and Stratification of Defective Grain Kernels
Lei Fan*, Dongdong Fan, Yiwen Ding, Yong Wu, Donglin Di, Maurice Pagnucco, Yang Song
IEEE Transactions on Industrial Informatics (TII), 2024
[ArXiv] [Project] [Code]
中科院一区 (IF:11.7) CCF-C

2024

GRPose: Learning Graph Relations for Human Image Generation with Pose Priors
Xiangchen Yin, Donglin Di, Lei Fan, Hao Li, Chen Wei, Xiaofei Gou, Yang Song, Xiao Sun, Xun Yang
AAAI Conference on Artificial Intelligence (AAAI), 2025
[ArXiv] [Code]
CCF-A A* (Australian Core)
ToCoAD: Two-Stage Contrastive Learning for Industrial Anomaly Detection
Yun Liang, Zhiguang Hu, Junjie Huang, Donglin Di, Anyang Su, Lei Fan*
IEEE Transactions on Instrumentation and Measurement (TIM), 2024
[ArXiv]
中科院二区 (IF:5.6)
Boundary-Guided Learning for Gene Expression Prediction in Spatial Transcriptomics
Mingcheng Qu, Yuncong Wu, Donglin Di, Anyang Su, Tonghua Su, Yang Song, Lei Fan*
IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024
[PDF] [Code]
CCF-B
Patch-Wise Augmentation for Anomaly Detection and Localization
Lei Fan*, Yiwen Ding, Maurice Pagnucco, Yang Song
IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2024
[PDF]
CCF-B B (Australian Core)

2023

AV4GAInsp: An Efficient Dual-Camera System for Identifying Defective Kernels of Cereal Grains
Lei Fan*, Dongdong Fan, Yiwen Ding, Yong Wu, Hongxia Chu, Maurice Pagnucco, Yang Song*
IEEE Robotics and Automation Letters (RA-L), 2023
[PDF] [Project]
中科院二区 (IF:5.2)
An annotated grain kernel image database for visual quality inspection
Lei Fan*+, Yiwen Ding+, Dongdong Fan, Yong Wu, Hongxia Chu, Maurice Pagnucco, Yang Song*
Scientific Data, 2023
[PDF] [Project]
中科院二区 (IF:9.8)
Identifying the Defective: Detecting Damaged Grains for Cereal Appearance Inspection
Lei Fan*, Yiwen Ding, Dongdong Fan, Yong Wu, Maurice Pagnucco, Yang Song
European Conference on Artificial Intelligence (ECAI), 2023
[PDF] [ArXiv] [Project]
CCF-B A (Australian Core)

2022

Cancer Survival Prediction From Whole Slide Images With Self-Supervised Learning and Slide Consistency
Lei Fan*, Arcot Sowmya, Erik Meijering, Yang Song*
IEEE Transactions on Medical Imaging (TMI), 2022
[PDF]
中科院一区 (IF:10.6) CCF-B A* (Australian Core)
Fast FF-to-FFPE Whole Slide Image Translation via Laplacian Pyramid and Contrastive Learning
Lei Fan*, Arcot Sowmya, Erik Meijering, Yang Song
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022
[PDF]
CCF-B A (Australian Core)
GrainSpace: A Large-scale Dataset for Fine-grained and Domain-adaptive Recognition of Cereal Grains
Lei Fan*+, Yiwen Ding+, Dongdong Fan, Donglin Di, Maurice Pagnucco, Yang Song
IEEE/CVF Computer Vision and Pattern Recognition Conference (CVPR), 2022
[PDF] [ArXiv] [Project]
CCF-A A* (Australian Core)

2021

Learning Visual Features by Colorization for Slide-Consistent Survival Prediction from Whole Slide Images
Lei Fan, Arcot Sowmya, Erik Meijering, Yang Song*
International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021
[PDF]
CCF-B A (Australian Core)

Activities

  • Serving as Reviewers:
    • Conference:
      • CVPR, ICCV, ECCV
      • MICCAI, ECAI, BIBM, ICRA, ICME, ICASSP
      • ISBI, PRICAI, IJCNN, KR
    • Journal:
      • IEEE Transactions on Medical Imaging
      • IEEE Transactions on Intelligent Transportation Systems
      • IEEE Sensors Letters
      • IEEE ACCESS
      • IET Image Processing
      • Journal of Field Robotics
      • Journal of Supercomputing
      • Journal of Real-Time Image Processing
      • Knowledge-based System
      • Scientific Reports
      • Scientific Data
      • Frontiers in Radiology
    • IEEE Transactions on Medical Imaging (TMI) Distinguished Reviewer