Lei Fan – Personal Homepage

About Me

I am currently a Postdoctoral Fellow at the Centre for Healthy Brain Ageing (CHeBA), UNSW. I received my PhD from UNSW Sydney in 2024, specializing in computer vision and machine learning.

My Research Interests:

Whole Slide Image Analysis
Visual Anomaly Detection
Grain Image Analysis
MRI Data Analysis

News

[2025–05]

1 paper (as Corr*) has been accepted for TIM (IF: 5.6).
2 papers (as Corr* and Equa+) have been accepted for MICCAI2025 (Early Accept!).

[2025–04]

1 paper (as Corr*) has been accepted for IJCAI2025.

[2025–03]

1 paper (as Corr*) has been accepted for PR (IF: 7.5).
2 papers (as Corr* and Corr*) have been accepted for ICME2025.

[2025–02]

3 papers (as First, Equa+ and Equa+) have been accepted for CVPR2025.

[2024–12]

1 paper (as First) has been accepted for IEEE TII (IF: 11.7).
1 paper has been accepted for AAAI2025.

[2024–11]

1 paper (as Corr*) has been accepted for IEEE TIM (IF: 5.6).

[2024–10]

1 paper (as Corr*) has been accepted for BIBM2024.

[2023–12]

1 paper (as First) has been accepted for ICASSP2024.

[2024–11]

1 paper (as First) has been accepted for IEEE RA-L (IF: 5.2).
1 paper (as First) has been accepted for cientific Data (IF: 9.8).

[2023–07]

1 paper (as First) has been accepted for ECAI2023.

[2022–10]

1 paper (as First) has been accepted for IEEE TMI (IF: 10.6).

[2022–05]

1 paper (as First) has been accepted for MICCAI2022.
1 paper (as First) has been accepted for CVPR2022.

[2021–05]

1 paper (as First) has been accepted for MICCAI2021 (Early Accept!).

Publications

2025

(Early Accept) Spatially Gene Expression Prediction using Dual-Scale Contrastive Learning

Mingcheng Qu, Yuncong Wu, Donglin Di, Yue Gao, Tonghua Su, Yang Song, Lei Fan(*Corr)

Medical Image Computing and Computer Assisted Intervention (MICCAI), 2025

[ArXiv] [Code]

CCF-B A (Australian Core)

(Early Accept) Hypergraph Tversky-Aware Domain Incremental Learning for Brain Tumor Segmentation with Missing Modalities

Junze Wang⁺, Lei Fan(⁺ Equal), Weipeng Jing, Donglin Di, Yang Song, Sidong Liu, Cong Cong(*Corr)

Medical Image Computing and Computer Assisted Intervention (MICCAI), 2025

[ArXiv] [Code]

CCF-B A (Australian Core)

Multimodal Cancer Survival Analysis via Hypergraph Learning with Cross-Modality Rebalance

Mingcheng Qu, Guang Yang, Donglin Di, Tonghua Su, Yue Gao, Yang Song, Lei Fan (*Corr)

International Joint Conference on Artificial Intelligence (IJCAI), 2025

[ArXiv] [Code]

CCF-A A* (Australian Core)

MANTA: A Large-Scale Multi-View and Visual-Text Anomaly Detection Dataset for Tiny Objects

Lei Fan(*Corr), Dongdong Fan, Zhiguang Hu, Yiwen Ding, Donglin Di, Kai Yi, Maurice Pagnucco, Yang Song

The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2025

[ArXiv] [Project]

CCF-A A* (Australian Core)

Prototype-Based Image Prompting for Weakly Supervised Histopathological Image Segmentation

Qingchen Tang⁺, Lei Fan(⁺Equal), Maurice Pagnucco, Yang Song

The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2025

[ArXiv] [Code]

CCF-A A* (Australian Core)

Interpretable Image Classification via Non-parametric Part Prototype Learning

Zhijie Zhu⁺, Lei Fan(⁺Equal), Maurice Pagnucco, Yang Song

The IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2025

[ArXiv] [Code]

CCF-A A* (Australian Core)

EFDiT: Efficient Fine-grained Image Generation Diffusion Transformer Models

Kun Wang, Donglin Di, Tonghua Su, Lei Fan(*Corr)

IEEE International Conference on Bioinformatics and Biomedicine (ICME), 2025

CCF-B A (Australian Core)

Global-Local Aware Scene Text Editing

Fuxiang Yang, Tonghua Su, Donglin Di, Yin Chen, Xiangqian Wu, Zhongjie Wang, Lei Fan(*Corr)

IEEE International Conference on Bioinformatics and Biomedicine (ICME), 2025

CCF-B A (Australian Core)

Multi-Modal Hypergraph Contrastive Learning for Medical Image Segmentation

Weipeng Jing, Junze Wang, Donglin Di, Dandan Li, Yang Song, Lei Fan(*Corr)

Pattern Recognition (PR), 2025

[Paper] [Code]

中科院一区 (IF:7.5, JCR:Q1) CCF-B A (Australian Core)

An Open-set Semi-Supervised Contrastive Learning for Bearing Fault Diagnosis

Wenxiao Cheng, Xue Li(*Corr), Donglin Di, Xiaohe Wu, Lanshun Nie, Dechen Zhan, Lei Fan(*Corr)

IEEE Transactions on Instrumentation and Measurement (TIM), 2025

中科院二区 (IF:5.6, JCR:Q1)

Before 2025 (12)

GRPose: Learning Graph Relations for Human Image Generation with Pose Priors

Xiangchen Yin, Donglin Di, Lei Fan, Hao Li, Chen Wei, Xiaofei Gou, Yang Song, Xiao Sun, Xun Yang

AAAI Conference on Artificial Intelligence (AAAI), 2025

[Paper] [ArXiv] [Code]

CCF-A A* (Australian Core)

Boundary-Guided Learning for Gene Expression Prediction in Spatial Transcriptomics

Mingcheng Qu, Yuncong Wu, Donglin Di, Anyang Su, Tonghua Su, Yang Song, Lei Fan(*Corr)

IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2024

[Paper] [ArXiv] [Code]

CCF-B B (Australian Core)

ToCoAD: Two-Stage Contrastive Learning for Industrial Anomaly Detection

Yun Liang, Zhiguang Hu, Junjie Huang, Donglin Di, Anyang Su, Lei Fan(*Corr)

IEEE Transactions on Instrumentation and Measurement (TIM), 2024

[Paper] [ArXiv]

中科院二区 (IF:5.6, JCR:Q1)

GrainBrain: Multi-View Identification and Stratification of Defective Grain Kernels

Lei Fan(*Corr), Dongdong Fan, Yiwen Ding, Yong Wu, Donglin Di, Maurice Pagnucco, Yang Song

IEEE Transactions on Industrial Informatics (TII), 2024

[Paper] [Project] [Code]

中科院一区 (IF:11.7, JCR:Q1) CCF-C

Patch-Wise Augmentation for Anomaly Detection and Localization

Lei Fan(*Corr), Yiwen Ding, Maurice Pagnucco, Yang Song

IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2024

[Paper]

CCF-B B (Australian Core)

Identifying the Defective: Detecting Damaged Grains for Cereal Appearance Inspection

Lei Fan(*Corr), Yiwen Ding, Dongdong Fan, Yong Wu, Maurice Pagnucco, Yang Song

European Conference on Artificial Intelligence (ECAI), 2023

[Paper] [ArXiv] [Project]

CCF-B B (Australian Core)

AV4GAInsp: An Efficient Dual-Camera System for Identifying Defective Kernels of Cereal Grains

Lei Fan(*Corr), Dongdong Fan, Yiwen Ding, Yong Wu, Hongxia Chu, Maurice Pagnucco, Yang Song(*Corr)

IEEE Robotics and Automation Letters (RA-L), 2023

[Paper] [Project]

中科院二区 (IF:5.2, JCR:Q1)

An annotated grain kernel image database for visual quality inspection

Lei Fan(*Corr)⁺, Yiwen Ding⁺, Dongdong Fan, Yong Wu, Hongxia Chu, Maurice Pagnucco, Yang Song(*Corr)

Scientific Data, 2023

[Paper] [Project]

中科院二区 (IF:9.8, JCR:Q1)

GrainSpace: A Large-scale Dataset for Fine-grained and Domain-adaptive Recognition of Cereal Grains

Lei Fan(*Corr)⁺, Yiwen Ding⁺, Dongdong Fan, Donglin Di, Maurice Pagnucco, Yang Song

IEEE/CVF Computer Vision and Pattern Recognition Conference (CVPR), 2022

[PDF] [ArXiv] [Project]

CCF-A A* (Australian Core)

Cancer Survival Prediction From Whole Slide Images With Self-Supervised Learning and Slide Consistency

Lei Fan(*Corr), Arcot Sowmya, Erik Meijering, Yang Song(*Corr)

IEEE Transactions on Medical Imaging (TMI), 2022

[PDF]

中科院一区 (IF:10.6, JCR:Q1) CCF-B A* (Australian Core)

Fast FF-to-FFPE Whole Slide Image Translation via Laplacian Pyramid and Contrastive Learning

Lei Fan(*Corr), Arcot Sowmya, Erik Meijering, Yang Song

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022

[PDF]

CCF-B A (Australian Core)

(Early Accept) Learning Visual Features by Colorization for Slide-Consistent Survival Prediction from Whole Slide Images

Lei Fan, Arcot Sowmya, Erik Meijering, Yang Song(*Corr)

International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2021

[PDF]

CCF-B A (Australian Core)

Activities

Serving as Guest Editor:
- Frontiers in Medicine & Frontiers in Digital Health
Serving as Reviewers:
- Conference:
  - CVPR25/24/23, ICCV25/23, ECCV24
  - MICCAI25/24/23, ECAI23, BIBM24, ICRA23, ICME24, ICASSP25/24
  - ISBI25, PRICAI24, IJCNN23, KR24
- Journal:
  - IEEE Transactions on Medical Imaging
  - IEEE Transactions on Intelligent Transportation Systems
  - IEEE Sensors Letters
  - IEEE ACCESS
  - IET Image Processing
  - Journal of Field Robotics
  - Journal of Supercomputing
  - Journal of Real-Time Image Processing
  - Knowledge-based System
  - Scientific Reports
  - Scientific Data
  - Frontiers in Radiology
- IEEE Transactions on Medical Imaging (TMI) Distinguished Reviewer 2024